原著論文(Refereed Papers)

1. Nagae, T., Yamada, H. and Watanabe, N.:
   High-pressure protein crystal structure analysis of ecDHFR complexed with folate and NADP+,
   Acta Cryst. D74(9), 895-905 (2018).
   https://doi.org/10.1107/S2059798318009397
   

2. Matsuoka, T., Nagae, T., Ode, H., Awazu, H., Kurosawa, T., Hamano, A., Matsuoka, K., Imahashi, M., Hachiya, A., Yokomaku, Y., Watanabe, N., Iwatani, Y.:
   Structural basis of chimpanzee APOBEC3H dimerization stabilized by double-stranded RNA.
   Nucl. Acids Res., 46(19), 10368-10379 (2018),
   https://doi.org/10.1093/nar/gky676
   

3. Ohmae, E., Hamajima, Y., Nagae, T., Watanabe, N., Kato, C.:
   Similar structural stabilities of 3-isopropylmalate dehydrogenases from the obligatory piezophilic bacterium Shewanella benthica strain DB21MT-2 and its atmospheric congener S. oneidensis strain MR-1,
   BBA - Proteins Proteomics, 1866, 680-691 (2018).
   https://doi.org/10.1016/j.bbapap.2018.04.001
   50 days' free access until June 01, 2018: https://authors.elsevier.com/c/1WtEN5bCYAJYKA

4. Nakashima, M., Tsuzuki, S., Awazu, H., Hamano, A., Okada, A., Ode, H., Maejima, M., Hachiya, A., Yokomaku, Y., Watanabe, N., Akari, H. and Iwatani, Y.:
   Mapping Region of Human Restriction Factor APOBEC3H Critical for Interaction with HIV-1 Vif,
   J. Mol. Biol., 429(8), 1262-1276 (2017).
   http://dx.doi.org/10.1016/j.jmb.2017.03.019

5. Watanabe, N., Nagae, T., Yamada, Y., Tomita, A., Matsugaki, N. and Tabuchi, M.:
   Protein crystallography beamline (BL2S1) at the Aichi synchrotron,
   J. Synchrotron Rad., 24(1), 338-343 (2017).
   https://doi.org/10.1107/S1600577516018579

6. Hamajima, Y., Nagae, T., Watanabe, N., Ohmae, E., Kato-Yamada, Y. and Kato, C.:
   Pressure adaptation of 3-isopropylmalate dehydrogenase from an extremely piezophilic bacterium is attributed to a single amino acid substitution,
   Extremophiles, 20(2), 177-186 (2016).
   http://dx.doi.org/10.1007/s00792-016-0811-4
   名大プレスリリース(PDF)
   http://www.nagoya-u.ac.jp/about-nu/public-relations/researchinfo/upload_images/20160210_nusrc.pdf

7. Nakashima, M., Ode, H., Suzuki, K., Fujino, M., Maejima, M., Kimura, Y., Masaoka, T., Hattori, J., Matsuda, M., Hachiya, A., Yokomaku, Y., Suzuki, A., Watanabe, N., Sugiura W. and Iwatani, Y.:
   Unique Flap Conformation in an HIV-1 Protease with High-level Darunavir Resistance and the I50V Mutation,
   Front. Microbiol. 7, 61 (2016).
   http://dx.doi.org/10.3389/fmicb.2016.00061

8. Nakashima, M., Ode, H., Kawamura, T., Kitamura, S., Naganawa, Y., Awazu, H., Tsuzuki, S., Matsuoka, K., Nemoto, M., Hachiya, A., Sugiura, W., Yokomaku, Y., Watanabe, N. and Iwatani, Y.:
   Structural Insights into HIV-1 Vif-APOBEC3F Interaction,
   J. Virology, 90(2), 1034-1047 (2016).
   http://dx.doi.org/10.1128/JVI.02369-15

9. Yamada, H., Nagae, T. and Watanabe, N.:
   High-pressure protein crystallography of hen egg-white lysozyme,
   Acta Cryst. D71(4), 742-753 (2015).
   http://dx.doi.org/10.1107/S1399004715000292

10. Koiwai, K., Kubota, T., Watanabe, N., Hori, K., Koiwai, O. and Masai, H.:
    Definition of the transcription factor TdIF1 consensus binding sequence through genome-wide mapping of its binding sites,
    Genes to Cells, 20(3), 242-254 (2015).

11. Kawamura, T., Kobayashi, T. and Watanabe, N.:
    Analysis of the HindIII catalyzed reaction by Time-Resolved Crystallography,
    Acta Cryst., D71(2), 256-265 (2015).
    http://dx.doi.org/10.1107/S1399004714025188

12. Hayashi, T., Tanaka, Y., Sakai, N., Okada, U., Yao, M., Watanabe. N, Tamura, T. and Tanaka, I.:
    Structural and genomic DNA analysis of the putative TetR transcriptional repressor SCO7518 from Streptomyces coelicolor A3(2),
    FEBS Lett. 588(23), 4311-4318 (2014).

13. Hamajima, Y., Nagae, T., Watanabe, N., Kato-Yamada, Y., Imai, T. and Kato, C.:
    Pressure Effects of the Chimeric 3-Isopropylmalate Dehydrogenases of the Deep-Sea Piezophilic Shewanella benthica and the Atmospheric Pressure Adapted Shewanella oneidensis,
    Biosci. Biotech. Biochem., 78(3), 469-471 (2014).

14. Sakabe, N., Sakabe, K., Ohsawa, S., Sakai, T., Kobayakawa, H., Sugimura, T., Ikeda, M., Tawada, M., Watanabe, N., Sasaki, K. and Wakatsuki, M.:
    U-shape rotating anti-cathode compact X-ray generator:20 times stronger than the commercially available X-ray source,
    J. Synchrotron Rad., 20(6), 829-833 (2013).

15. Chavas, LMG, Nagae, T., Yamada, H., Watanabe, N., Yamada, Y., Hiraki, M. and Matsugaki, N.:
    New methodologies at PF AR-NW12A: implementation of high-pressure macromolecular crystallography,
    J. Synchrotron Rad., 20(6), 838-842 (2013).

16. Hayashi, T., Tanaka, Y., Sakai, N., Okada, U., Yao, M., Watanabe, N., Tamura, T. and Tanaka, I.:
    SCO4008, a putative TetR transcriptional repressor from Streptomyces coelicolor A3(2), regulates transcription of sco4007 by multidrug recognition,
    J. Mol. Biol., 425(18), 3289-3300 (2013).

17. Kubota, T., Koiwai, O., Hori, K., Watanabe, N. and Koiwai, K.:
    TdIF1 Recognizes a Specific DNA Sequence through Its Helix-Turn-Helix and AT-Hook Motifs to Regulate Gene Transcription,
    PLOS ONE, 8(7), e66710 (2013).
    http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0066710

18. Hayashi, T., Tanaka, Y., Sakai, N., Watanabe, N., Tamura, T., Tanaka, I. and Yao, M.:
    Structural and genomic DNA analysis of a putative transcription factor SCO5550 from Streptomyces coelicolor A3(2): regulating the expression of gene sco5551 as a transcriptional activator with a novel dimer shape,
    Biochem. Biophys. Res. Commun., 435(1), 28-33 (2013).
    

19. Fujihashi, M., Hiraki, M., Ueno, G., Baba, S., Murakami, H., Suzuki, M., Watanabe, N., Tanaka, I., Nakagawa, A., Wakatsuki, S., Yamamoto, M. and Miki, K.:
    Crystal-sample pins and a storage cassette system compatible with the protein crystallography beamlines at both the Photon Factory and SPring-8,
    J. Appl. Cryst., 45(6), 1156-1161 (2012).
    http://dx.doi.org/10.1107/S002188981203734X

20. Kitamura, S., Ode, H., Nakashima, M., Imahashi, M., Naganawa, Y., Kurosawa, T., Yokomaku, Y., Yamane, T., Watanabe, N., Suzuki, A., Sugiura, W. and Iwatani, Y.:
    The crystal structure of APOBEC3C and the interface for HIV-1 Vif binding,
    Nature Structural & Molecular Biology, 19, 1005-1010 (2012).
    http://www.nature.com/nsmb/journal/v19/n10/full/nsmb.2378.html
    doi:10.1038/nsmb.2378

21. Goddard-Borger, ED., Sakaguchi, K., Reitinger, S., Watanabe, N., Ito, M. and Withers, SG.:
    Mechanistic Insights into the 1,3-Xylanases: Useful Enzymes for Manipulation of Algal Biomass,
    J. Am. Chem. Soc., 134(8), 3895-3902 (2012).
    http://pubs.acs.org/doi/abs/10.1021/ja211836t

22. Nagae, T., Kawamura, T., Chavas, LMG., Niwa, K., Hasegawa, M., Kato, C. and Watanabe, N.:
    High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase,
    Acta Cryst., D68(3), 300-309 (2012).
    http://dx.doi.org/10.1107/S0907444912001862

23. Nagae, T., Kato, C. and Watanabe, N.:
    Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1,
    Acta Cryst., F68(3), 265-268 (2012).
    http://dx.doi.org/10.1107/S1744309112001443

24. Kouno, T., Watanabe, N., Sakai, N., Nakamura, T., Nabeshima, Y., Morita, M., Mizuguchi, M., Aizawa, T., Demura, M., Imanaka, T., Tanaka, I. and Kawano, K.:
    The structure of Physarum polycephalum hemagglutinin I suggests a minimal carbohydrate recognition domain of lectin fold,
    J. Mol. Biol., 405(2), 560-569 (2011).

25. Nureki, O., O'Donoghue, P., Watanabe, N., Ohmori, A., Oshikane, H., Araiso, Y., Sheppard, K., Söll, D. and Ishitani, R.:
    Structure of an archaeal non-discriminating glutamyl-tRNA synthetase: a missing link in the evolution of Gln-tRNA${}^{Gln}$ formation,
    Nucleic Acids Research, 38(20), 7286-7297 (2010).

26. Itou, H., Watanabe, N., Yao, M., Shirakihara, Y. and Tanaka, I.:
    Crystal structures of the multidrug binding repressor Corynebacterium glutamicum CgmR in complex with inducers and with operator,
    J. Mol. Biol., 403(2), 174-184 (2010).

27. Kitago, Y., Watanabe, N., and Tanaka, I.:
    Semi-automated protein crystal mounting device for the sulphur SAD method,
    J. Appl. Cryst., 43(2), 341-346 (2010).
    http://dx.doi.org/10.1107/S0021889809054272

28. Padmanabhan, B., Bessho, Y., Ebihara, A., Antonyuk, S.V., Ellis, M.J., Strange, R.W., Kuramitsu, S., Watanabe, N., Hasnain, S.S. and Yokoyama, S.:
    Structure of putative 4-amino-4-deoxychorismate lyase from Thermus thermophilus HB8,
    Acta Cryst., F65(12), 1234-1239 (2009).
    

29. Watanabe, N., Takasaki, Y., Sato, C., Ando, S. and Tanaka, I.:
    Structures of restriction endonuclease HindIII in complex with its congante DNA and divalent cations,
    Acta Cryst., D65(12), 1326-1333 (2009).
    http://dx.doi.org/10.1107/S0907444909041134

30. Kawano, S., Naoe, M., Momose, T., Terao, K., Nishikawa, S., Yamano, K., Watanabe, N. and Endo, T.:
    Structural basis of yeast Tim40/Mia40 as an oxidative translocater in the mitochondrial intermembrane space,
    PNAS., 106(34), 14403-14407 (2009).

31. Nonaka, Y., Akieda, D., Aizawa, T., Watanabe, N., Kamiya, M., Kumaki Y., Tanaka, I., Mizuguchi, M., Kikukawa T., Demura, M., and Kawano, K.:
    X-ray crystallography and structural stability of digestive lysozyme from cow stomach,
    FEBS J., 276(8), 2192-2200 (2009).

32. Kitamura, M., Okuyama, M., anzawa, F., Mori, H., Kitago, Y., Watanabe, N., Kimura, A., Tanaka, I. and Yao, M.:
    Structural and Functional Analysis of a Glycoside Hydrolase Family 97 Enzyme from Bacteroides thetaiotaomicron,
    J. Biol. Chem., 283(52), 36328-36337 (2008).

33. Gao, Y., Suzuki, H., Itou, H., Zhou, Y., Tanaka, Y., Wachi, M., Watanabe, N, Tanaka, I. and Yao, M.:
    Structural and Functional Characterization of the LidR from Corynebacterium glutamicum: a Transcriptional Repressor Involved in L-Lactate and Sugar Utilization,
    Nucleic Acids Research, 36(22), 7110-7123 (2008).

34. Kawamura, T., Watanabe, N. and Tanaka, I.:
    Structure of mannosyl-3-phosphoglycerate phosphatase from Pyrococcus horikoshii,
    Acta Cryst. D64(12), 1267-1276 (2008).

35. Ikuta, Y., Karita, S., Kitago, Y., Watanabe, N and Hirata, F.:
    A Water Molecule Identified as a Substrate of Enzymatic Hydrolysis of Cellulose: A Statistical-Mechanics Study,
    Chem. Phys. Lett., 465(4-6), 279-284 (2008).

36. Watanabe, M., Tanaka, Y., Suenaga, A., Kuroda, M., Yao, M., Watanabe, N., Arisaka, F., Ohta, T., Tanaka, I. and Tsumoto, K.:
    Structural basis for multimeric heme complexation through a specific protein-heme interaction: the case of the third NEAT domain of IsdH from Staphylococcus aureus,
    J. Biol. Chem., 283(42), 28649-28659 (2008).

37. Sakabe, N., Ohsawa, S., Sugimura, T., Ikeda, M., Tawada, M., Watanabe, N., Sasaki, K., Ohshima, K., Wakatsuki, M. and Sakabe, K.:
    Highly bright X-ray generator using heat of fusion with a specially designed rotating anticathode,
    J. Synchrotron Rad., 15(3), 231-234 (2008).

38. Begum, P., Sakai, N., Hayashi, T., Gao, Y-G., Tamura, T., Watanabe, N., Yao, M. and Tanaka, I.:
    Crystal Structure of SCO6571 from Streptomyces coelicolor A3(2),
    Protein & Peptide Letters, 15(7), 709-712 (2008).

39. Nonaka, Y., Aizawa, T., Akieda, D., Watanabe, M., Watanabe, N., Tanaka, I., Kamiya, M., Mizuguchi, M., Demura, M. and Kawano, K.:
    Spontaneous Asparaginyl Deamidation of Canine Milk Lysozyme under Mild Conditions,
    Proteins: Structure, Function, and Bioinformatics, 72(1), 313-322 (2008).

40. Tanaka, Y., Sakamoto, S., Kudora, M., Goda, S., Gao, Y., Tsumoto, K., Hiragi, Y., Yao, M., Watanabe, N., Ohta, T. and Tanaka, I.:
    A Helical String of Alternately Connected Two Three-helix Bundles for the 1.1-Megadalton Cell Wall-Associated Adhesion Protein Ebh from Staphylococcus aureus,
    Structure, 16(3), 488-496 (2008).

41. Itou, H., Yao, M., Watanabe, N. and Tanaka, I:
    Crystal structure of the PH1932 protein, a unique archaeal ArsR type winged-HTH transcription factor from Pyrococcus horikoshii OT3,
    Proteins: Structure, Function, and Bioinformatics, 70(4), 1631-1634 (2008).

42. Okada, U., Kondo, K., Hayashi, T., Watanabe, N., Yao, M., Tamura, T. and Tanaka, I.:
    Structural and functional analysis of the TetR-family transcriptional regulator SCO0332 from Streptomyces coelicolor,
    Acta Cryst., D64(2), 198-205 (2008).

43. Yao, D., Li, H., Chen, Q., Gu, Y., Zheng, C., Lin, Z., Fan, H., Watanabe, N. and Sha, B.:
    SAD phasing by OASIS at different resolutions down to 0.30 nm and below,
    Chinese Physics, 17(1), 1-9 (2008).

44. Kitago,Y., Karita, S., Watanabe, N., Kamiya, M., Aizawa, T., Sakka, K. and Tanaka, I.:
    Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum
    J. Biol. Chem., 282(49), 35703-35711 (2007).

45. Tanaka, Y., Kuroda, M., Yasutake, Y., Yao, M., Tsumoto, K., Watanabe, N., Ohta, T. and Tanaka, I.:
    Crystal structure analysis reveals a novel forkhead-associated domain of ESAT-6 secretion system C protein in Staphylococcus aureus,
    Proteins: Structure, Function, and Bioinformatics, 69(3), 659-664 (2007).

46. Kasai, S., Urushibara, S., Hozumi, K., Yokoyama, F., Ichikawa, N., Kadoya, Y., Nishi, N., Watanabe, N., Yamada, Y. and Nomizu, M.:
    Identification of Amyloidogenic Sequences in Laminin-1,
    Biochemistry, 46(13), 3966-3974 (2007).

47. Iyaguchi, D., Yao, M., Watanabe, N., Tanaka, I. and Toyota, E.:
    Crystallization and preliminary x-ray studies of the unliganded wild-type bovine thrombin,
    Protein Pept. Lett., 14(9), 923-924 (2007).

48. Iyaguchi, D., Yao, M., Watanabe, N., Nishihira, J. and Tanaka, I.:
    DNA Recognition Mechanism of the ONECUT Homeodomain of Transcription Factor HNF-6,
    Structure, 15(1), 75-83 (2007).

49. Tanaka, Y., Morikawa, K., Ohki, Y., Yao, M., Tsumoto, K., Watanabe, N., Ohta, T. and Tanaka, I.:
    Structural and Mutational analyses of Drp35 from Staphylococcus aureus: a possible mechanism for its lactonase activity,
    J. Biol. Chem., 282(8), 5770-5780 (2007).

50. Hiyama, T., Zhao, M., Kitago, Y., Yao, M., Sekine, S., Terada, T., Kuroishi, C., Liu, ZJ., Rose, JP., Kuramitsu, S., Shirouzu, M., Watanabe, N., Yokoyama, S., Tanaka, I., Wang, BC.:
    Structural basis of CoA recognition by the Pyrococcus single-domain CoA-binding proteins,
    J. Struct. Funct. Genomics, 7(3-4), 119-129 (2006)

51. Iyaguchi, D., Yao, M., Watanabe, N., Nishihira, J. and Tanaka I.
    Crystallization and preliminary X-ray studies of the DNA-binding domain of hepatocyte nuclear factor-6alpha complexed with DNA,
    Protein Pept. Lett., 13(5), 531-533 (2006).

52. Watanabe, N.:
    From phasing to structure refinement in-house: Cr/Cu dual wavelength system and an loopless free crystal mounting method,
    Acta Cryst., D62(8), 891-896 (2006).
    http://www.iucr.org/cgi-bin/paper?dz5067

53. Yao, D., Huang, S., Wang, J., Gu, Y., Zheng, C., Fan, H., Watanabe, N. and Tanaka, I.:
    SAD phasing by OASIS-2004: case studies of dual-space fragment extension,
    Acta Cryst., D62(8), 883-890 (2006).
    http://www.iucr.org/cgi-bin/paper?dz5070

54. Maegawa, Y., Morita, H., Iyaguchi, D., Yao, M., Watanabe, N. and Tanaka, I.:
    Crystal Structure of A-type ATP synthase catalytic nucleotide-binding subunit A from Pyrococcus horikoshii reveals a novel domain related in the peripheral stalk,
    Acta Cryst., D62(5), 483-488 (2006).
    

55. Okada, U., Sakai, N., Yao, M., Watanabe, N. and Tanaka, I.:
    Structural analysis of the trasncriptional regulator homolog protein from Pyrococcus horikoshii OT3,
    Proteins: Structure, Function, and Bioinformatics, 63(4), 1119-1122 (2006).

56. Itou, H., Okada, U., Suzuki, H., Yao, M., Wachi, M., Watanabe, N. and Tanaka, I:
    The CGL2612 Protein from Corynebacterium glutamicum Is a Drug Resistance-Related Transcriptional Repressor: Structural and Functional Analysis of a Newly Identified Transcription Factor from Genomic DNA Analysis,
    J. Biol. Chem., 280(46), 38711-38719 (2005).

57. Watanabe, N., Kitago, Y., Tanaka, I., Wang, J., Gu. Y., Zheng, C. and Fan H.:
    Comparison of phasing methods for sulfur-SAD using in-house chromium radiation: case studies for standard proteins and 69-kDa protein,
    Acta Cryst., D61(11), 1533-1540 (2005).
    http://www.iucr.org/cgi-bin/paper?dz5050

58. Kitago, Y., Watanabe, N. and Tanaka, I.:
    Structure determination of a novel protein by sulphur SAD using chromium radiation in combination with a new crystal mounting method,
    Acta Cryst., D61(8), 1013-1021 (2005).
    http://www.iucr.org/cgi-bin/paper?dz5036

59. Watanabe, N.:
    Modified Nextal crystallization device for in situ inspection of protein crystal quality,
    J. Appl. Cryst., 38(2), 396-397 (2005).
    http://www.iucr.org/cgi-bin/paper?he5324

60. Tajika, Y., Sakai, N., Tamura, T., Yao, M., Watanabe, N. and Tanaka, I.:
    Crystal structure of PH0010 from Pyrococcus Horikoshii, which has high homology to human AMMECR1 C-terminal region,
    Proteins: Structure, Function, and Bioinformatics, 58(2), 501-503 (2005).

61. Sakai, N., Tajika, Y., Yao, M., Watanabe, N. and Tanaka, I.:
    Crystal structure of hypothetical protein PH0642 from Pyrococcus Horikoshii at 1.6A resolution,
    Proteins: Structure, Function, and Bioinformatics, 57(4), 869-873 (2004).

62. Tajika, Y., Sakai, N., Tamura, T., Yao, M., Watanabe, N. and Tanaka, I.:
    Crystal structure of hypothetical protein PH0828 from Pyrococcus Horikoshii,
    Proteins: Structure, Function, and Bioinformatics, 57(4), 862-865 (2004).

63. Ose,T., Fujie, T., Yao, M., Watanabe, N., and Tanaka, I.:
    Crystal structure of the ATP-binding cassette of multi-sugar transporter from Pyrococcus horikoshii OT3,
    Proteins: Structure, Function, and Bioinformatics, 57(3), 635-638 (2004).

64. Fujino, A., Ose, T., Yao, M., Tokiwano, T., Honma, M., Watanabe, N., and Tanaka, I.:
    Structural and enzymatic insights into inerness of 1-aminocyclopropane-1-carboxylate deaminase homologue from Pyrococcus horikoshii,
    J. Mol. Biol., 341(4), 999-1013 (2004).

65. Sakaguchi, K., Kiyohara, M., Watanabe, N., Yamaguchi, K., Ito, M., Kawamura, T. and Tanaka, I.:
    Preparation and preliminary X-ray analysis of the catalitic module of beta-1,3-xylanase from the marine bacterium, Vibrio sp. strain AX-4,
    Acta Cryst. D60(8), 1470-1472 (2004).

66. Maegawa, Y., Morita, H., Yao, M., Watanabe, N. and Tanaka, I.:
    Crystallization and preliminary X-ray diffraction study of catalytic subunit of Archaeal H+-transporting ATPsynthase from Pyrococcus horikioshii OT3,
    Acta Cryst., D60(8), 1484-1486 (2004).

67. Itou, H., Yao, M., Watanabe, N. and Tanaka, I.:
    Structure analysis of PH1161 protein, a transcriptional activator TenA homologue from the hyperthermophilic archaeon Pyrococcus horikoshii,
    Acta Cryst., D60(6), 1094-1100 (2004).

68. Ishikawa, I., Sakai, N., Tamura, T., Yao, M., Watanabe, N. and Tanaka, I.:
    Crystal Structure of Human p120 homologue PH1374 from Pyrococcus Horikoshii,
    Proteins: Structure, Function, and Bioinformatics, 54(4), 814-816 (2004).

69. Tajika, Y., Sakai, N., Yao, M., Watanabe, N. and Tanaka, I.:
    Crystal Structure of Conserved Protein PH1136 From Pyrococcus horikoshii,
    Proteins: Structure, Function, and Bioinformatics, 55(1), 210-213 (2004).

70. Ose, T., Fujino, A., Yao, M., Watanabe, N., Honma, M. and Tanaka, I.:
    Reaction Intermediate Structures of 1-Aminocyclopropane-a-carboxylate Deaminase,
    J. Biol. Chem. 278(42), 41069-41076 (2003).

71. Sokabe, M., Kawamura, T., Sakai, N., Yao, M., Watanabe, N., and Tanaka, I.:
    The X-ray Crystal Structure of Pyrrolidone-Carboxylate Peptidase from Hyperthermophilic Archaea Pyrococcus horikoshii.
    J. Struct. Funct. Genomics. 2(3), 145-154 (2002).

72. Watanabe, N., Murai, H., and Tanaka, I.:
    Semi-automatic protein crystallization system that allows in situ observation of X-ray diffraction from crystals in the drop.
    Acta Cryst. D58(10), 1527-1530 (2002).
    http://www.iucr.org/cgi-bin/paper?ic0003

73. Yamada, M., Kadoya, Y., Kasaki, S., Kato, K., Mochizuki, M., Nishi, N., Watanabe, N., Kleinman, H.K., Yamada, Y., and Nomizu, M.:
    Ile-Lys-Val-Ala-Val (IKVAV)-contaminating laminin $\alpha 1$ chain peptides from amyloid-like fibrils.
    FEBS Letters 530(1), 48-52 (2002).

74. Itou, H., Yao, M., Fujita, I., Watanabe, N., Suzuki, M., Nishihira, J., and Tanaka, I.:
    The Crystal Structure of Human MRP14 (S100A9), a Ca2+-dependent Regulator Protein in Inflammatory Process.
    J. Mol. Biol. 316(2), 265-276 (2002).

75. Sakai, N., Yao, M., Itou, H., Watanabe, N., Yumoto, F., Tanokura, M. and Tanaka, I.:
    The three-dimensional structure of septum site-determining protein MinD from Pyrococcus horikoshii OT3 in complex with Mg-ADP.
    Structure 9(9), 817-826 (2001).

76. Itou, H., Fujita, I., Ishikawa, K., Yao, M., Watanabe, N., Suzuki M., Nishihira, J. and Tanaka, I.:
    Expression, purification, crystallization, and preliminary X-ray diffraction analysis of human calcium-binding protein MRP14 (S100A9).
    Acta Cryst. D57(8), 1174-1176 (2001).

77. Sakai, N., Itou, H., Watanabe, N., Yao, M. and Tanaka, I.:
    The MinD protein from hyperthermophilic archaeon Pyrococcus horikoshii, crystallization and preliminary X-ray analysis.
    Acta Cryst. D57(6), 896-897 (2001).

78. Sakabe, N., Sakabe, K., Higashi, T., Igarashi, N., Suzuki, M., Watanabe, N. and Sasaki, K.:
    Automatic Weissenberg data collection system for time-resolved protein crystallography.
    Nucl. Instrum. Methods A, 467-468(2), 1367-1371 (2001).

79. Watanabe, N.:
    A very simple and cheap grease device for crystallization plates.
    J. Applied Cryst., 34(2), 224-224 (2001).

80. Sasaki, K., Watanabe, N., Sakabe, N. and Sakabe, K.:
    Computer network system with security for a protein data collection system at the Photon Factory.
    J. Synchrotron Rad., 6(2), 116-118 (1999).

81. Watanabe, N., Suzuki, M., Higashi, Y. and Sakabe, N.:
    Rotated-inclined focusing monochromator with simultaneous tuning of asymmetry factor and radius of curvature over a wide wavelength range.
    J. Synchrotron Rad., 6(2), 64-68 (1999).

82. Sakabe, K., Sasaki, K., Watanabe, N., Suzuki, M., Wang, Z.G., Miyahara, J. and Sakabe, N.:
    Large-format Imaging Plate and Weissenberg Camera for Accurate Protein Crystallographic Data Collection Using Synchrotron Radiation.
    J. Synchrotron Rad., 4(3), 136-146 (1997).

83. Kamiya, N., Sasaki, K., Watanabe, N., Sakabe, N., and Sakabe, K.:
    Time-Resolved Protein Crystallography with Large-Angle Oscillations: an Application of a Protein Data-Collection System Using the Weissenberg Technique and a Large-Format Imaging Plate.
    J. Synchrotron Rad., 4(1), 14-16 (1997).

84. Watanabe, N., Nakagawa, A., Adachi, S., and Sakabe, N.:
    Macromolecular crystallography station BL-18B at the Photon Factory.
    Rev. Sci. Instrum., 66(2), 1824-1826 (1995).

85. Sakabe, N., Ikemizu, S., Sakabe, K., Higashi, T., Nakagawa, A., Watanabe, N., Adachi, S., and Sasaki, K.:
    Weissenberg camera for macromolecules with imaging plate data collection system at the Photon Factory: Present status and future plan.
    Rev. Sci. Instrum., 66(2), 1276-1281 (1995).

86. Watanabe, N., Sakabe, K., Sakabe, N., Higashi, T., Sasaki, K., Aibara, S., Morita, Y., Yonaha, K., Toyama, S. and Fukutani, H.:
    Crystal Structure Analysis of $\omega{}$-Amino Acid : Pyruvate Aminotransferase with a Newly Developed Weissenberg Camera and an Imaging Plate Using Synchrotron Radiation.
    J. Biochem. (Tokyo), 105(1), 1-3 (1989).

87. Watanabe, N., Shimizu, M. and Tanaka, J.:
    Application of Transform Theory to Resonance CARS Excitation Profiles of a Cyanine Dye.
    J. Raman Spectrosc., 18(6), 381-385 (1987).